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Bibliometrics

Bibliometrics

Verification toolkit

Verification toolkit

Between 2007 and 2011 it was possible to address Karolinska Institutet publications to not only departments, but also KI networks and research units. Since an analysis on this data was never requested during the period, it was decided that the addressing process could be simplified by removing this option.

If you at some point entered this information for your publications, it still exists although hidden in the user interface. If you wish to see what group/network addressing information we have for your publications, send an email to ub@ki.se and we'll mail it back to you.

The My profile page shows the information about you that is known by the bibliometric system. Some is imported from the Karolinska Institutet and SLL staff catalogues KIMKAT and EK, but some can be entered or changed by you directly in the bibliometric system.

My names
The My names section shows the namestrings that we use to locate you as an author on the publications in the database. The primary use is to simplify for you to find your publications via the auto suggestion list on the first page, but sometimes they are also used in analyses to identify your place in the author list.

Your primary namestring is automatically generated from KIMKAT or EK. This cannot be deleted or changed by you and is for technical reasons not updated automatically even if changed in KIMKAT/EK, so if you do not publish under the name listed here you need to contact the university library to have it changed (ub@ki.se).

Add alternative namestrings
Under Add alternative namestrings you can add any other names that you've published under. This is for example advisable if you have a middle initial on some of your publications, if you have a double family name (with or without hyphen) or if you have changed your family name during your career as a researcher.

By default, searches based on namestrings are limited to publications with Sweden somewhere in the address field. You can remove this limit on namestrings if you wish (for example if you've published while at another university).

My affiliation
This information is retrieved from the Karolinska Institutet and SLL staff catalogues KIMKAT and EK. If the information is incorrect you have to contact your local KIMKAT/EK-administrator to get it changed. For SLL-affiliations you can choose to uncheck your active affiliation(s) as research affiliations.

My Field of Science(s)
Once a year you have to select/update/confirm at least one current research field according to the 2011 SCB/HSV standard. This information is requested by the board of research as a part of the quality strengthening work at Karolinska Institutet.
More information

Since August 2011 it is mandatory to enter the field(s) of science for your current research according to the 2011 SCB/HSV standard in the bibliometric verification toolkit.

This information is requested by the board of research as a part of the quality enhancing work at Karolinska Institutet. It is a tool which will help KI measure the output of Karolinska Institutet per reseach area in coming evaluations.

You may supply up to three different fields of research, and therefore you must rank them as 1 to 3 with 1 being your primary field.The information has to be confirmed or updated at least once a year but may be updated as often as you wish.

Information about the standard  is available (in Swedish only) at the Swedish National Agency for Higher Education

All researchers at Karolinska Institutet/SLL are regularly requested to verify their publications in the Karolinska Institutet bibliometric system. A detailed walkthrough is available trough the links below.

Instructions for verifying

Instruktioner för verifiering (sv)

Yes. You should supply the addresses of all the research organizations where you were active when you produced each individual publication. However, you should NOT enter the addresses of your coauthors.

Here is how you do it:

  1. Mark the checkbox to the left of all publications that should receive the same address.
  2. Choose one organizational unit from the drop down menus (For exemple: Karolinska Institutet; Department of Medicine, Solna; KI Circulation and Respiration; Walldius, Göran).
  3. Click on the button 'Verfy publication(s)'.
  4. Mark the checkbox to the left of all publications that should receive the next address.
  5. Choose the second organizational unit from the drop down menus (For example: Stockholms läns landsting (SLL); Karolinska Universitetssjukhuset; Hjärtkliniken)
  6. Click on the button 'Verify publication(s)"

Go back and redo step 1-3 to supply another address and so on.

At present, the bibliometric database is directly based on the Web of Science databases produced by Thomson Reuters and is limited to records available in those databases. Articles indexed by PubMed or any other database are at the moment available only if they are also included in the Web of Science databases.
The Web of Science web interface also includes proceedings papers. These are not available in the Karolinska Institutet bibliometric system.
To make sure that the publication is not in the bibliometric database, try and search the publication with each and one of the three tools. If you still can't find it - is it a recent article? It may take anything between a couple of weeks to several months after publication until an article is indexed in the Web of Science, a fact that will be mirrored by this database.

The autogenerated list is based on the name strings in your user profile: primary namestring and alternative namestring(s). Since this may for some researchers with common names result in extremely many hits, the system filters out publications that don't have Sweden in the address information.

Click on Edit my names to add namestrings and/or uncheck the limit to Sweden.

Note: The list of names should only include varieties of your own name, not any of your coauthors, since this may affect analyses results.

No.

Regardless of how you log in, you will access the same profile in the verification toolkit. We match your username to both organizations to avoid duplicate user accounts.

If you check your profile under My profile you can see if we have connected you to KI and/or SLL and to what clinic/department. If any of your affiliations is missing the page contains instructions on how to fix this.

However, when you supply the address to where you were active when the publications were produced (the Written at tab) you should be careful to supply both addresses when appropriate.

This information is retrieved from the Karolinska Institutet and SLL staff catalogues KIMKAT and EK.

Information in the bibliometric database about organizational affiliation is updated once a day which means it can take 24 hours for any change in KIMKAT/EK to take effect.

If the error persists more than a few days, please contact your local KIMKAT administrator/EK-administrator to check that the information about  you in those systems is correct. If the information is correct in KIMKAT/EK, please send an email to ub@ki.se and we'll help you find out what's wrong.

Please contact the University Library customer services, ub@ki.se, 08-524 84000.

If you clicked on the decline icon Decline icon, you can still find the publication and confirm it as yours with one of the other tools.

If you clicked on the remove icon Remove icon,  you can search for the publication with the Free text search tool or the PMID-tool and retrieve it that way.

The PubMed Id search in the verification toolkit only searches publications in our bibliometric system, not in PubMed. It is possible that we have failed to match your PubMed id to the correct record in our database. To make sure, please try and retrieve the record through a free text search instead. If you still cannot find it, the reason may be that the database at present only includes publications in our bibliometric system, not all publications included in PubMed.

Yes. Please verify all your publications written since 1995 and specify which organisation you belonged to at the time.

You do not need to use wildcards in your search. The system automatically searches for the truncated name, for instance if you type  Anders  in the search box both  Anders  and  Andersson  will be found.

Yes, we recommend that you verify your publications of all document types. You do not have to worry that abstracts, corrections and other document types will affect your citation indicators, such as the field normalized citation score. Such indicators are only calculated on the document types Articles and Reviews, and in some cases also Letters and Notes.

Analysis toolkit

Analysis toolkit

When you log in to the bibliometric system we collect information about the different affiliations you have in the two staff catalouges, KIMKAT (KI) and EK (SLL). The collected information is displayed in "My Profile" at My verification toolkit. You can only see analysis results for yourself as a person and you are resricted to wiewing bibliometric aggregated data for your affiliated institution/clinic or the entire affiliated organization KI or SLL. If you are a Head of departement/Head of administration at KI or Head of reasearch and development at SLL you will be presented other possibilites. 

A boxplot graphically shows groups of numerical data through their five-number summaries: the smallest observation, lower quartile, median, upper quartile, and largest observation. The spacing between the different parts of the box help indicate the spread and skewness in the data. Here you can see a statistical summary of the indicators of your publications compared to those of your organisation.

The decentile bars show average indicator values divided into decentiles within your organisation. The bars consist of the same number of authors grouped according to their indicator value. The marked bar indicates the decentile where your own value is present. If the bar with the highest value is filled that means that your indicator value is among the 10% highest ranked reasearcher in KI according to the selected indicator and yearspan.

To reduce the biases of career age and sheer size of publication sample for a research er/constellation it is sometimes valid to calculate some indicators based on the 5, 10 or 15 publications with the highest indicator values for that specific indicator. For example, the indicator Citation average (C/P) can be calculated on the most highly cited publications for each person. In the bibliometric analysis toolkit the result show how highly cited your 5, 10 or 15 top publications are compared to top publications by other researchers at Karolinska Institutet/SLL. The purple bars show in which decentile you can be found based on the average number citations to your top publications. You can also see the average value for each decentile.

In the table of co-authors all unique name strings are considered as unique authors. If you add alternative name strings however, such as historical surnames, in your profile, they disappear in the list of co-publication authors. If you find a name string in the list that belongs to you, you should probably add that to your profile to get better automated guesses on publications to verify.

Presently we only include data from Web of Science from 1995- in our system. Furthermore we only include results based on original articles and review articles that have been verified in our system in these lists.

You can log in with either a KI-login (KI) or a HSA-id (SLL). Choose which option you want to use by clicking the either the KI Login button or the SLL Login button on the login page.

KI-login: The Karolinska Institutet IT Centrum offers e-mail accounts, KI-login and VPN (Virtual Private Network) http://intra.ki.se/it/kiid/index_en.html.

HSA-id: SLL uses a login name of 4 characters called HSA-id for most SLL-systems. To be able to login to the bibliometric system you also have to use one of two authentication options

  • a card reader connected to your computer
  • a temporary authentication code via SMS (If you do not have your mobile phone number registered in EK you will have to contact your local EK-administrator and get your number registered first)

Information about the use of bibliometrics in the allocation of research funds from KI/SLL to departments/clinics is available at Bibliometrics at Karolinska Institutet and Stockholm County Council

It's safe to click Yes here. If you click No the export to Excel will not open.

An orange griffin is sometimes displayed when a user in one of the university hospitals is logged in on the KI library web site or proxy server and then tries to log in to the bibliometric verification toolkit as well.

Please close all web browser windows and then go directly to the login page of the bibliometric verification toolkit (http://bibliometrics.ki.se/users/login) without passing another KI login service.

Bibliometric indicators are calculated for each publication individually. Indicators for an individual researcher will be shown when this person logs in to the Karolinska Institutet bibliometric database. An analysis based on field normalized indicators for an individual researcher with less than 50 publications cannot be ordered by someone else.

List of indicators available through the bibliometric system (For a full list of bibliometric indicators and explanations to how they are calculated, see “Bibliometric handbook for Karolinska Institutet” and “Bibliometric indicators - definitions and usage at KI”).

  • P: Number of publications identified with the current analyzed set of publications.
  • At KI/SLL: Number of verified publications with a recognizable KI address (including university hospitals). Verified means that the publications in the Karolinska Institutet bibliometric database have both been identified by the researcher in question and that an organizational affiliation has been supplied by him/herself.
  • C: Total number of citations
    The Total number of citations is the sum of citations (self citations included) from all publications present in the database to all verified publications for the analyzed set of publications.
  • c: Number of citations to a single publication
  • cf:: Field Normalized Citation Score for a single publication
    The Item Oriented Field Normalized Citation Score normalizes the number of citations to a single verified publication by comparing it to the mean number of citations to documents of the same type, published the same year, in the same research area.
  • Avg Cf: Field Normalized Citation Score Average
    The average Field Normalized Citation Score is calculated on The Item Oriented Field Normalized Citation Score for all verified publications for the current analyzed set of publications. The world average is about 1, and an indicator of for example 1.2 means that the analyzed group of articles is cited 20% above the world average. (At present the standard method of using the ISI Journal Classifications to identify the research area is being used.)
  • Sum Cf: Total Field Normalized Citation Score
    The sum of all the item oriented field normalized citation scores for all verified publications for the active selection.
  • Pf5%: Field Normalized Top Publications
    The indicator Field Normalized Top Publications shows the number of verified publications for the active selection that belong to the 5% most cited publications in the world. The normalization is made by comparing the number of citations to each verified publication to the 95th percentile of citation distruibution to all publications from the same year, in the same subject and of the same document type. (At present the standard method of using the ISI Journal Classifications to identify the research area is being used).
  • Share Pf5%: Field Normalized Share of Top Publications
    The indicator Field Normalized Share of Top Publications shows the percentage of verified publications for the current analyzed set of publications that belong to the 5% most cited publications in the world. The normalization is made by comparing the number of citations to each verified publication to the 95th percentile of the average citations to all publications from the same year, in the same subject and of the same document type. (At present the standard method of using the ISI Journal Classifications to identify the research area is being used).
  • JIF: ISI Journal Impact Factor
    The ISI Journal Impact Factor is a measure of the frequency with which the "average article" in a journal has been cited in a particular year. The ISI impact factor for a specific journal, one specific year (Y), is calculated by counting the number of citations to articles in that journal the two preceding years (Y-1 and Y-2) from publications in year Y and dividing this with the number of publications.
  • ∑ JIF: Sum of ISI Journal Impact Factors
    The sum of the ISI Journal Impact Factors connected to each verified article or review in the active selection.
  • Avg JIF: Average of ISI Journal Impact Factors
    The average of the ISI Journal Impact Factors connected to each verified article or review in the active selection.


Note!

No field normalized indicators are calculated for

  • too recent publications (with a publication year equal to the present year or last year)
  • publications belonging to fields with fewer than 30 publications per year
  • publications belonging to fields with an average citation rate lower than 0,2 cites per year
  • for a subset of publications less than 50 publications

Moreover, the compiled indicators are only based on publications with document type "Article" or "Review".

This is to ensure statistical stability.

In the verification toolkit each verified publication with a not too recent publication year (see note above) also displays the value of the Item Oriented Field Normalized Citation Score for that individual publication, and will if it is one of the 5% most highly cited publications from that year in its field show a text indicating this.

For a copublication analysis we use information about who wrote the article and where they were active when they wrote it as a proxy for the research institution or country involved.

However, the quality of this data in the Web of Science is limited. Different people may publish under the same name, and some researchers (especially those with a double family name) may be published under many different name forms. Also the quality of addresses may bee of varying level with dozens of different versions of for example Karolinska Institutiet.

Using the information in the addresses field, we can for instance look at co-publication at the country level. This kind of list is useful when assessing the level of international collaboration.

We can also look at the different authors in the publications and list the most frequent co-authors. Combining author and address information, we can also see who at Karolinska Institutet publish together with which organizations in one specific country or within any other subset of publications we can define, such as a subject field or a specific set of journals.

Using the information in the addresses field, we can look at co-publication at the organizational level, for example all KI publications together with Chinese organizations. This kind of analysis is useful for finding potential organizations for a formalized cooperation, or to evaluate already active cooperation agreements.

Within Karolinska Institutet we can use the higher data quality ensured by the verification process where we get to know the different namestrings to an individual researcher and the standardized affiliation of every publication in order to do copublication analysis with much more detail than otherwise possible.

There are presently two ways that we can identify the research fields of individual articles. One is to use the Thomson Reuters journal subject field as a proxy for article content. This is very often used in bibliometric studies. But in medicine, many of the publications also have MeSH-terms, the controlled vocabulary from Medline, which are much more specific, and at Karolinska Institutet we often use these.

An analysis of the journal categories of a unit’s/persons publications gives an indication of in which areas the analyzed unit is active. From this type of analysis, it is also possible to identify the type of audience that can be expected to read, and potentially cite the publications. It can be used as the basis for a discussion about whether this is where you want to publish and be seen.

An analysis of the MeSH-terms is much more specific and can help you see how your publications are shown in an international database like Medline, ie what other researchers need to search for in order to find your publications. If you don’t know the analyzed group, you can see what major and peripheral aspects of research the group is involved in for instance for your Institution/clinic.

Combined with information about individual authors and/or organizations we can produce maps that show what factions co-publish in which certain areas.

At present, the bibliometric database is directly based on the Web of Science databases produced by Thomson Reuters and is limited to records available in those databases published 1995- . Articles indexed by PubMed or any other database are at the moment available only if they are also included in the Web of Science databases.

The Web of Science web interface also includes proceedings papers. These are not available in the Karolinska Institutet bibliometric system.

The primary aim of the Karolinska Institutet/SLL bibliometric database is to furnish Karolinska Institutet/SLL managers, departments/clinics and employees with high quality bibliometric analyses and reports (regarding e.g. publication patterns, co-publication partners and/or by-subject breakdowns). The results provide overviews of the research being conducted by KI/SLL researchers as well as tools that enable scientific results to be compared internally and with the work being done in other countries. Analyses results can also be used to follow up and plan activities, and sometimes even to assess and reward scientific quality.

The incentives from the board of research for publishing could be condensed to:

  • Before you publish, do a little background research into the journal to which you intend to submit your article; it should be included in the Web of Science index.
  • Check the journal’s impact factor and consider whether you can choose one with a higher value.
  • One high-cited article usually gives better returns on the bibliometric indicators than several low-cited articles.
  • Verify all your publications. It is essential to the quality of the database, and there is an explicit intention for the choice of bibliometric model to be such that the verification of all your publications has an aggregate positive effect.
  •  

Read the full recommendations (PDF).

It is possible, and desirable, for authors to verify all of their publications, also when written at other organizations than Karolinska Institutet/SLL. This is because two different types of analyses may be of value in different situations.

The internationally more common type of analysis, the “organization-based” analysis, uses knowledge about where the publications were written. It mirrors everything done by an organization during a certain time. This is the method of choice if one wishes to study the development over time of a specific research environment such as a university.

An organization based analysis of one individual Karolinska Institutet author will include the publications that he/she wrote while active at Karolinska Institutet. At Karolinska Institutet/SLL data for this type of analysis comes either from the authors' addresses as written on the publications or from the addresses that the authors supplied when they verified the publication in the bibliometric system.

An “author-based” analysis includes all publications written by researchers presently affiliated to the analyzed organization, regardless of where they were active when they wrote it. This more accurately mirrors the current research potential of the organization and is therefore the method used for many bibliometric analyses within Karolinska Institutet.

At Karolinska Institutet/SLL data for this type of analysis comes from the authors' current affiliations according to the staff catalogues KIMKAT and EK."

You can search for a journal's impact factor in the database Journal Citation Reports (JCR)

Thesis

Thesis

Please contact Bildmakarna at KI.

E-mail: bildmakarna@ki.se
Phone: 08 - 524 842 01 or 08 - 524 842 00

Since January 1st 2005 it is mandatory to e-publish doctoral theses and since January 1st 2011 it is mandatory to e-publish licentiate theses at KI.

After the defence application is accepted by the dissertation committee, you will receive an e-mail from publications@ki.se with instructions on how to proceed.

After you have uploaded you files at http://publications.ki.se, you will receive another e-mail frpn publications@ki.se telling you to go to the library (Solna or Huddinge) to finilize the e-publishing.

If you have any questions, don't hesitate to contact publications@ki.se.

15 copies of the doctoral thesis and 3 copies of the licentiate thesis. The doctoral thesis is sent to other university libraries and to whomever orders a copy.

The copies are available to anyone who is interested in your thesis. If not all copies are given out, they can be collected no later than three months after the public defence, and no earlier than one month after.

If you don't pick them up we have to discard them due to lack of space.

If you want to you can keep the copy you nailed to the wall in the library in Huddinge or Solna, but you must pick it up yourself one week after the public defence at the latest.

The Word template for theses is available in several different versions: Thesis template

The library is currently unable to provide support for the template.

Bildmakarna

Bildmakarna

You will find Bildmakarna at Campus Solna.

E-mail: bildmakarna@ki.se
Phone: 08 - 524 842 01 or 08 - 524 842 00

 

Open access

Open access

Research funders like the NIH, The Swedish Research Council, Wellcome Trust and the EU Seventh Framework Programme (FP7), have all adopted open access (i.e. free online access) requirements for research publications. To help you fulfill the funders' demands an electronic open archive has been established where you may deposit full-text copies of your published articles.

If your article has been or will be published in a traditional journal we will help you find out what version and when your article can b emade available in the archive. Articles published open access can also be uploaded in the archive.

How to deposit your article:

  1. Go to the Open Archive at Karolinska Institutet.
  2. Choose "My page" in the menu to the left.
  3. Log in using your KI-login (you don't have to register, just log in).
  4. Click on the button "Submit a new publication".
  5. Choose collection: "Artiklar/Articles".
  6. Fill in all the required fields (Describe), click on "Next" on the bottom of the page.
  7. Upload your file (Upload), click on "Next" on the bottom of the page (twice).
  8. Verify that everything looks OK (Verify), click on "Next" on the bottom of the page.
  9. Approve (or not) the license by clicking the appropriate button on the bottom of the page.
  10. The document has been uploaded and sent to the administrators at the library.
  11. Expect an e-mail from publications@ki.se containing a unique and persistent link to your document.

Questions? E-mail publications@ki.se.

BioMed Central  and SpringerOpen
As a KI researcher you get a 15% discount off the publishing fee if you publish your article open access at BioMed Central and SpringerOpen. If you submit your article from a computer within the KI network, BioMed Central will recognize your IP address and the discount will be automatically deducted. The publishing fees vary among the different BioMed Central and SpringerOpen journals.

PNAS
If you choose to publish your article open access with PNAS (Proceedings of the National Academy of Sciences), you will pay $950 instead of $1275. You will have to inform PNAS that you are a KI researcher to get the discount.

Mary Ann Liebert
If you choose to publish your article open access with Mary Ann Liebert, you will receive a 50% discount on the publishing fee ($3000). You will have to inform PNAS that you are a KI researcher to get the discount.

KIB lab

KIB lab

In KIB-labb we can help you with the search process, references and critical evaluation of sources.

KIB-labb is open Monday-Friday between 11-16 pm on drop in basis.  Just go to group room 5 in Solna or "Skansen" in Huddinge (located on the upper floor of the library). 

 

Ping Pong

Ping Pong

All KI students get an account in Ping Pong, KI´s web based learning management system. You access Ping Pong at http://pingpong.ki.se and log in with your student account.

You can also access password protected material at the courseweb, courses.ki.se,  with this login.

To help you get started please read the short manual. Once inside Ping Pong you´ll find more instructions under the heading "Help"

If you forget your login credentials for Ping Pong, please contact Lyktan helpdesk: phone +46 (0) 524 84 000; e-mail: lyktan@ki.se.

Websurvey

Websurvey

You find information about the web based evaluation tool Websurvey on the KI teacher page.